摘要： 提出一种新的迭代渐进多序列比对算法IPMSA。采用公共多序列比对数据库BAliBASE中142组蛋白质序列作为比对测试数据,并与ClustalW进行比较。比对结果的统计分析表明,IPMSA算法的比对准确率高于ClustalW。
关键词:
迭代渐进多序列比对,
渐进比对算法,
迭代策略,
准确率
Abstract: This paper describes an iteratively progressive multi-sequence alignment algorithm IPMSA. The 142 groups’ proteins in BAliBASE test the validation of the algorithm. The result of comparision with ClustalW shows that the new algorithm improves the accuracy of multiple sequence alignment effectively.
中图分类号:
张敏,方伟武,张俊华,迟忠先. 基于迭代渐进多序列比对算法研究[J]. , 2005, 31(17): 42-.
ZHANG Min1, 3, FANG Weiwu2, ZHANG Junhua2, CHI Zhongxian1. Algorithm Based on Iteratively Progressive Multiple Sequence Alignment[J]. , 2005, 31(17): 42-.